BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B09SP1|AL425815
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1544 0.0
>3x_Contig1682
Length = 16889
Score = 1544 bits (777), Expect = 0.0
Identities = 801/811 (98%)
Strand = Plus / Minus
Query: 1 tgtattacccggggtggaaaaggcaggtgcagacgcgtgtgtgtgtttttctacaaacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13398 tgtattacccggggtggaaaaggcaggtgcagacgcgtgtgtgtgtttttctacaaacct 13339
Query: 61 tgatwcatggattcgagttgtacgcgatgcgtgcgatcattcctatcggagccggagttt 120
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13338 tgattcctggattcgagttgtacgcgatgcgtgcgatcattcctatcggagccggagttt 13279
Query: 121 tgggagtaaaaatwaaagaacgatgagtaatcaatgtcacgtgagtgtaccgtccacttt 180
|||| || ||||| | ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 13278 tgggcgtcaaaattacagaccgatgagtaatcaatgtcacgtgagtgtaccgtccacttt 13219
Query: 181 ctcacgtgactttaatttgatattggtttcaaaatatatcaaaatgcgggtaatacatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13218 ctcacgtgactttaatttgatattggtttcaaaatatatcaaaatgcgggtaatacatac 13159
Query: 241 ttgggtccaaggaaggaaaaaactataccccgggtaacacgcccctaagaattgcccact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13158 ttgggtccaaggaaggaaaaaactataccccgggtaacacgcccctaagaattgcccact 13099
Query: 301 tttcttcctgtttcgttatttttatatatyagatttgattttagcacacatatacaagtt 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 13098 tttcttcctgtttcgttatttttatatatcagatttgattttagcacacatatacaagtt 13039
Query: 361 cgaatctatggaatatacacaacaacagattgtcaaagggaaaatagtgcacaattacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13038 cgaatctatggaatatacacaacaacagattgtcaaagggaaaatagtgcacaattacac 12979
Query: 421 aggcttaacgcgcactagacccctcaattagcaattatggtcgaagtatcgctcaacgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 12978 aggcttaacgcgcactagacccctcaattagcaattatggtcgaagtatcgctcaccgtc 12919
Query: 481 gggaaagtcgacgcgtcgctcgccattctcacgactgcagaccactacgttatcgaattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12918 gggaaagtcgacgcgtcgctcgccattctcacgactgcagaccactacgttatcgaattt 12859
Query: 541 cctaccgttttattaccagaatcagtggaagcagggtctgtcgttaacattactgttgaa 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12858 cctaccgttttattaccagaatcagtggaagcagggtctgtcgttaccattactgttgaa 12799
Query: 601 caagacttagaacaagagattaaacagaaaaagaagtttcaaagtgtgcaagaacaaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12798 caagacttagaacaagagattaaacagaaaaagaagtttcaaagtgtgcaagaacaaatt 12739
Query: 661 ctcgccaagtatggtaccgatcctccagcagagcccgttttacatctctcgaatgctact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12738 ctcgccaagtatggtaccgatcctccagcagagcccgttttacatctctcgaatgctact 12679
Query: 721 caaacaagttgcgttatccattgggacccaatccatctgggttcgtctcaattgaaatcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12678 caaacaagttgcgttatccattgggacccaatccatctgggttcgtctcaattgaaatcg 12619
Query: 781 ctaatcttgtacaagcaaggaaataggcacc 811
|||||||||||||||||||||||||||||||
Sbjct: 12618 ctaatcttgtacaagcaaggaaataggcacc 12588
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5474
Number of Sequences: 1807
Number of extensions: 5474
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)